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--- tutorial:using_sojourn_time [2013/07/29 13:57]
juliana
+++ tutorial:using_sojourn_time [2020/02/18 23:11] (current)
argemiro
@@ Line 1: / Line 1: @@
 ====== Using Sojourn Time ======
+Load the model ''simulate_deforestation_and_abandonment_using_sojourn_time.egoml'' from ''\Guidebook_Dinamica_5\Models\additional_resources_lucc\sojourn_time\simulate_deforestation_and_abandonment_using_sojourn_time''.
-Load the model “simulate_deforestation_and_abandonment_using_sojourn_time.xml” from \Examples.
 The use of sojourn time implies that a specific transition or event will not occur unless a certain time has passed since a specific event has occurred.
@@ Line 21: / Line 19: @@
 {{ :tutorial:advanced_14.jpg |}}
-The sojourn time concept is applied to constrain a change. An easy way to do this is by modifying the corresponding probability map. As these maps are stacked in a cube raster set, you need first to extract the layers from the cube raster set, so the //Calculate Map// will be able to manipulate them separately.
+The sojourn time concept is applied to constrain a change. An easy way to do this is by modifying the corresponding probability map. As these maps are stacked in a cube raster set, you need first to extract the layers from the cube raster set, so the //[[:Calculate Map]]// will be able to manipulate them separately.
 {{ :tutorial:advanced_15.jpg |}}
-After calculating the probability map using //Calc W. of E. Probability Map//, the layer of the transition from deforested to abandon (transition 1 to 8) undergoes a new calculation. This is a comparison of the sojourn time. If a deforested cell is older than 3 years, its probability is kept unchanged. If it is not, the probability to change to abandon is set to zero, impeding, as result, this transition to take place.
+After calculating the probability map using //[[:calc_w._of_e._probability_map|Calc W. of E. Probability Map]]//, the layer of the transition from deforested to abandon (transition 1 to 8) undergoes a new calculation. This is a comparison of the sojourn time. If a deforested cell is older than 3 years, its probability is kept unchanged. If it is not, the probability to change to abandon is set to zero, impeding, as result, this transition to take place.
-<note>The transition functors (//Patcher// and //Expander//) do not change cells with transition probabilities equal to zero.</note>
+<note>The transition functors (//[[:Patcher]]// and //[[:Expander]]//) do not change cells with transition probabilities equal to zero.</note>
 {{ :tutorial:advanced_16.jpg |}}
-Then, the probability layers (the original layer with transition 2 to 1 and the new layer with transition 1 to 8) are put together again as a new cube raster dataset, which is passed on to the transition functions, //Expander// and //Patcher//.
+Then, the probability layers (the original layer with transition 2 to 1 and the new layer with transition 1 to 8) are put together again as a new cube raster dataset, which is passed on to the transition functions, //[[:Expander]]// and //[[:Patcher]]//.
 {{ :tutorial:advanced_17.jpg |}}
@@ Line 37: / Line 35: @@
 ==== Using sojourn time and deterministic transitions ====
-Load the model “simulate_def_aband_and_deterministic_transition.xml” from \Examples\ sim_defor_and_aband_using_sojourn_time_and_deterministic_transition
+Load the model ''simulate_def_aband_and_deterministic_transition.egoml'' from ''\Guidebook_Dinamica_5\Models\additional_resources_lucc\sojourn_time\simulate_deforestation_and_abandonment_using_sojourn_time_and_deterministic_transition''
 In this example, transition from abandon (land abandoned undergoes regeneration) to forest is deterministically determined based only on the sojourn time. So after a period in regrowth, the abandoned parcel has acquired a forest structure similar to a mature forest, thereby considered as forest. The minimum sojourn time for this transition to occur is 21 years (Fig.2)
 [{{ :tutorial:advanced_19.jpg |Fig.2 Transition from abandon to forest are deterministically determined solely based on sojourn time.}}]
-An additional transition from deforested land to abandon is added to the previous model. Calculate Categorical Map placed at the end of the model is employed to perform this transition. Its rule is the following:
+An additional transition from deforested land to abandon is added to the previous model. //[[:Calculate Categorical Map]]// placed at the end of the model is employed to perform this transition. Its rule is the following:
 **if i1 = 8 and i2 > 20 then 2 else i1**
-i1 is the landscape map and i2 is the sojourn map (forest is 2, abandon is 8). Note that for simplicity, it’s not possible to clear areas in abandon (transition 8 to 1). This could be added to the model as a new transition. Texeira et al. (2009) provide an example of modeling the landscape dynamics of the Atlantic forest, which includes multistate and transition from forest to various land-use.
+i1 is the landscape map and i2 is the sojourn map (forest is 2, abandon is 8). Note that for simplicity, it’s not possible to clear areas in abandon (transition 8 to 1). This could be added to the model as a new transition. [[ http://dx.doi.org/10.1016/j.foreco.2008.10.011|Texeira et al. (2009)]] provide an example of modeling the landscape dynamics of the Atlantic forest, which includes multistate and transition from forest to various land-use.
 {{ :tutorial:advanced_20.jpg |}}
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